ADASTRA v6.1.0
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rs225014
chr14:80203237
T
>
C
Sequence
tgccactgttgtcacctccttctg[T/C]actggagacatgcaccacactgga
ASB in cell types
GM12892 (female B-cells lymphoblastoid cell line)
GM19239 (male B-cells lymphoblastoid cell line)
ASB for transcription factors
CTCF_HUMAN
STAG1_HUMAN
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View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN
0.87
0.54
0.02
1.00
1.28
n/a
No Hit
STAG1_HUMAN
1.26
0.88
0.05
0.79
1.03
n/a
n/a
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
EMBL-EBI
free thyroxine concentration
GRASP
advanced age-related macular degeneration (choroidal neovascularization) vs. no amd
,
hypertension (early onset hypertension)
,
mitral annular calcium
,
obesity with early age of onset (age >2)
,
variant creutzfeldt-jakob disease
GTEx eQTL
Thyroid
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)