rs225150 chr20:10474737 G>A
- Sequence
ccactatgttgcagccaaacttcc[G/A]aagtgaaaagcagtttattccatc
- ASB in cell types
- MS-1 (Small cell lung carcinoma) CD14+ monocytes
- ASB for transcription factors
- CTCF_HUMAN STAT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.28 | -2.35 | 2.00 | n/a | No Hit | |||
| STAT1_HUMAN | -1.74 | 2.53 | 2.00 | n/a | No Hit |
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