rs225166 chr4:52026009 A>G

Sequence
tgttaagcaggcagctagatatgt[A/G]actcttagttcagaggagaggtta
ASB in cell types
GM02255 (Lymphoblastoid Cell Lines) foreskin keratinocyte
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
GM02255 (Lymphoblastoid Cell Lines) -0.77 1.97 1.002.9·10-3 1.00
foreskin keratinocyte n/a 1.75 1.004.4·10-3 2.50
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Motif analysis

No data available

Genetic associations

GRASP body mass index (bmi),  height,  serum creatinine
GTEx eQTL Adipose_Subcutaneous,  Artery_Aorta,  Artery_Tibial,  Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Brain_Cortex,  Brain_Frontal_Cortex_BA9,  Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Colon_Sigmoid,  Esophagus_Mucosa,  Heart_Atrial_Appendage,  Heart_Left_Ventricle,  Muscle_Skeletal,  Nerve_Tibial,  Ovary,  Pancreas,  Prostate,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Spleen,  Stomach,  Testis,  Thyroid

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