rs225213 chr17:32569608 G>A
- Sequence
gagcaatgggagacgcccaggagt[G/A]tgaattccctgcctccataatgcc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- IKZF2_HUMAN EP300_HUMAN MEF2B_HUMAN FOXK2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF2_HUMAN | 1.19 | -0.86 | 1.00 | n/a | n/a | |||
| EP300_HUMAN | 1.88 | -0.91 | 1.00 | n/a | n/a | |||
| MEF2B_HUMAN | 0.67 | -0.67 | 1.00 | n/a | No Hit | |||
| FOXK2_HUMAN | -2.06 | 2.33 | 1.00 | n/a | No Hit |
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