ADASTRA v6.1.0
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rs225315
chr21:42393356
T
>
C
Sequence
ttcacatgaagtgaaaggaaatgg[T/C]cccccacctacagtcacaggggta
ASB in cell types
MOLT-4 (Adult T acute lymphoblastic leukemia)
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
COE1_HUMAN
MEF2B_HUMAN
CDK9_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
COE1_HUMAN
2.74
-2.06
1.4·10
-5
1.00
1.00
n/a
No Hit
MEF2B_HUMAN
0.91
n/a
6.0·10
-3
1.00
1.67
n/a
No Hit
CDK9_HUMAN
-1.55
2.61
1.00
0.02
2.00
n/a
n/a
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GTEx eQTL
Lung
,
Thyroid
,
Whole_Blood
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)