rs226041 chr16:21276373 G>A

Sequence
gaatgccatctcggttggatgagt[G/A]taagttggggaaagctagatattc
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
IKZF1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN -0.26 2.38 1.000.01 1.25 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy) ldl cholesterol
GTEx eQTL Adipose_Subcutaneous Artery_Tibial Colon_Transverse Heart_Atrial_Appendage Heart_Left_Ventricle Lung Muscle_Skeletal Skin_Sun_Exposed_Lower_leg Small_Intestine_Terminal_Ileum Testis Thyroid

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