ADASTRA v6.1.0
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rs2261
chr2:38202621
T
>
C
Sequence
ccgtcaggctcaacactgcctcct[T/C]agtgagcctgtgaaccacccaaga
ASB in cell types
CHL-1 (Melanoma)
ASB for transcription factors
BRD4_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
BRD4_HUMAN
1.97
-0.26
0.02
1.00
1.00
n/a
n/a
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
advanced age-related macular degeneration (choroidal neovascularization) vs. no amd
,
eye color
,
height
,
hip bone mineral density (bmd)
,
ldl cholesterol
,
partial epilepsy
GTEx eQTL
Colon_Sigmoid
,
Muscle_Skeletal
,
Nerve_Tibial
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)