rs2277 chr1:13730763 G>A
- Sequence
ttttggaaatggccacaggtggct[G/A]gaacaaaatagagtaacacagaca
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) primary B-CLL cells
- ASB for transcription factors
- IKZF2_HUMAN NR2C1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF2_HUMAN | 2.11 | -0.11 | 1.00 | n/a | n/a | |||
| NR2C1_HUMAN | -2.24 | 2.36 | 1.00 | -0.77 | Weak Discordant |
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Motif analysis
