ADASTRA v6.1.0
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rs2286576
chr12:4604842
T
>
G
Sequence
cgggggcgcagtctaactgagaag[T/G]tgtcctgggggagagcgttctgga
ASB in cell types
VCaP (prostate carcinoma)
HMEC (human mammary epithelial cells)
GM12865 (female B-cells)
HBMEC (human brain microvascular endothelial cells)
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(+3 others)
ASB for transcription factors
ZN580_HUMAN
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View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZN580_HUMAN
-1.57
2.36
1.00
0.04
1.50
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
adiponectin levels
GTEx eQTL
Adipose_Subcutaneous
,
Adipose_Visceral_Omentum
,
Artery_Tibial
,
Brain_Cerebellar_Hemisphere
,
Brain_Cerebellum
,
Muscle_Skeletal
,
Nerve_Tibial
,
Testis
,
Whole_Blood
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)