rs230049 chr5:13498488 T>G
- Sequence
aaatgttttctcactatgcaaata[T/G]ttgctcacctttataaatattcct
- ASB in cell types
- breast tumor xenograft
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 3.04 | -4.69 | 1.50 | -1.02 | Weak Concordant |
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Motif analysis
