ADASTRA v6.1.0
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rs230889
chr17:15320165
G
>
A
Sequence
tgttactcctttccatcttcacca[G/A]tgtgatggaaccacacccccacca
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
P53_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
P53_HUMAN
2.87
-2.94
0.05
1.00
1.00
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
body mass index (bmi)
,
hdl cholesterol
,
parkinsons disease
GTEx eQTL
Adipose_Subcutaneous
,
Adipose_Visceral_Omentum
,
Breast_Mammary_Tissue
,
Nerve_Tibial
,
Testis
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)