rs231986 chr3:172517054 A>G
- Sequence
ttgttggggcaagaaggtgtgcat[A/G]acacagaaaggagggagcggtatg
- ASB in cell types
- breast tumor 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ESR1_HUMAN CTCF_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | -0.93 | 2.98 | 2.00 | 2.59 | Concordant | |||
| CTCF_HUMAN | -0.28 | 1.29 | 1.33 | n/a | No Hit | |||
| ANDR_HUMAN | 0.38 | 2.74 | 1.59 | n/a | No Hit |
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Motif analysis
