rs2341365 chr1:1013312 G>A
- Sequence
tgccgtccgctgtccggagtcccc[G/A]ccacttttgcttttccctgtcttt
- ASB in cell types
- HEK293 (embryonic kidney) CD14+ monocytes
- ASB for transcription factors
- ZN366_HUMAN KLF9_HUMAN STAT1_HUMAN PATZ1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN366_HUMAN | n/a | 3.91 | 2.00 | n/a | n/a | |||
| KLF9_HUMAN | n/a | 3.87 | 2.00 | -0.61 | Weak Discordant | |||
| STAT1_HUMAN | n/a | 2.87 | 3.00 | 0.05 | Weak Concordant | |||
| PATZ1_HUMAN | n/a | 3.08 | 2.00 | -1.60 | Weak Discordant | |||
| KLF10_HUMAN | n/a | 3.22 | 2.00 | -1.09 | Weak Discordant |
Items per page:
1 – 5 of 9
Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Muscle_Skeletal, Pancreas, Spleen, Stomach, Whole_Blood