rs235007 chr20:49609248 G>A
- Sequence
acaggaggcactcctccaacatca[G/A]tgtcctcctctcaatgccagcact
- ASB in cell types
- K562 (myelogenous leukemia) glioblastoma cells HEK293 (embryonic kidney) pancreas
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| K562 (myelogenous leukemia) | 0.07 | 0.86 | 1.99 | |||
| glioblastoma cells | n/a | 1.73 | 2.00 | |||
| HEK293 (embryonic kidney) | 0.53 | 0.93 | 2.05 | |||
| pancreas | -0.25 | 0.96 | 1.00 | |||
| H929 (plasma cell myeloma) | n/a | 1.23 | 2.00 |
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