rs2350708 chr4:65998996 G>A

Sequence
tgggatataatctcgtggtgtgcc[G/A]ttttttaagcccttcggaaaagtg
ASB in cell types
HepG2 (hepatoblastoma) CTV-1 (Adult T acute lymphoblastic leukemia)
ASB for transcription factors
SPI1_HUMAN TBX3_HUMAN ETS1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN 2.25 -0.44 3.4·10-61.00 1.00 n/a No Hit
TBX3_HUMAN 2.90 -2.88 0.011.00 1.00 n/a No Hit
ETS1_HUMAN 2.23 -0.56 0.020.96 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Nerve_Tibial,  Small_Intestine_Terminal_Ileum,  Thyroid

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