rs2351958 chr11:16226474 C>A
- Sequence
ccttcacactaaggaggaaatgcc[C/A]gacacagcacagaggagcatgtgt
- ASB in cell types
- LNCaP (prostate carcinoma) VCaP (prostate carcinoma) LNCaP95 A549 (lung carcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN GCR_HUMAN ERG_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 0.08 | 1.92 | 1.61 | n/a | No Hit | |||
| FOXA1_HUMAN | 0.01 | 2.30 | 1.88 | n/a | No Hit | |||
| GCR_HUMAN | 0.21 | 2.49 | 2.00 | n/a | No Hit | |||
| ERG_HUMAN | -0.79 | 2.08 | 2.00 | n/a | No Hit | |||
| A2NVP9_HUMAN | -0.41 | 1.62 | 1.50 | n/a | n/a |
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