rs2352591 chr4:48080357 A>G

Sequence
agaggcagagtggagacagaatat[A/G]cactatattctacgcgtaagcatt
ASB in cell types
BEAS-2B (bronchial epithelium) endometrial stromal cells
ASB for transcription factors
GATA2_HUMAN GCR_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GATA2_HUMAN n/a 3.23 1.000.01 3.00 n/a No Hit
GCR_HUMAN 1.07 0.40 0.020.92 1.00 -0.38 Weak Concordant
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Motif analysis

GCR_HUMAN Weak Concordant
GCR_HUMAN pic

Genetic associations

GTEx eQTL Adipose_Subcutaneous,  Muscle_Skeletal,  Skin_Not_Sun_Exposed_Suprapubic,  Spleen

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