rs2353836 chr10:86580714 C>A

Sequence
ttaccactgtgggcagctggagct[C/A]tgttcccctatggagccctggaag
ASB in cell types
MDM(monocyte derived macrophages)
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
MDM(monocyte derived macrophages) 1.37 0.28 1.6·10-41.00 2.29
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol,  height,  obesity with early age of onset (age >2),  partial epilepsy
GTEx eQTL Adipose_Visceral_Omentum,  Artery_Aorta,  Artery_Tibial,  Brain_Caudate_basal_ganglia,  Brain_Cortex,  Brain_Frontal_Cortex_BA9,  Muscle_Skeletal,  Skin_Sun_Exposed_Lower_leg,  Whole_Blood

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