rs2354022 chr16:86555049 G>C

Sequence
cacagaccccctctgacctcctcg[G/C]ccgcttccggtgattctgccccat
ASB in cell types
K562 (myelogenous leukemia) adult erythroblasts

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
K562 (myelogenous leukemia) 0.19 0.69 1.002.5·10-3 2.13
adult erythroblasts n/a 2.05 1.000.04 2.50
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Motif analysis

No data available

Genetic associations

GRASP suicide attempts in bipolar disorder (substance free)
GTEx eQTL Artery_Tibial,  Colon_Transverse,  Esophagus_Gastroesophageal_Junction,  Esophagus_Mucosa,  Esophagus_Muscularis,  Lung,  Muscle_Skeletal,  Testis,  Thyroid,  Whole_Blood

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