rs2354423 chr16:10578271 G>T

Sequence
tcctccctgttaattacctgttgc[G/T]ggaaattggggagtctgtgcacat
ASB for transcription factors
SCRT2_HUMAN
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SCRT2_HUMAN -5.59 3.26 1.003.7·10-3 2.00 0.30 Weak Concordant
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Motif analysis

SCRT2_HUMAN Weak Concordant
SCRT2_HUMAN pic

Genetic associations

GRASP irritible bowel syndrome,  microalbuminuria,  urinary albumin-to-creatinine ratio
GTEx eQTL Lung,  Nerve_Tibial,  Pancreas,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg

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