rs2357541 chr2:10293820 T>C
- Sequence
ttgaacttattttcatgtgcttat[T/C]ggccaatgtctatcttccttggag
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- RFX5_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RFX5_HUMAN | 4.27 | -4.15 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP chronic kidney disease, college completion, hdl cholesterol, hdl cholesterol change with statins, microalbuminuria, mitral annular calcium, urinary albumin-to-creatinine ratio