rs2359373 chr1:197995212 A>G
- Sequence
agtggaagcgaggatacttgttag[A/G]aggctgttgcaatactcggagtgg
- ASB in cell types
- K562 (myelogenous leukemia) A549 (lung carcinoma) HepG2 (hepatoblastoma)
- ASB for transcription factors
- EP300_HUMAN GCR_HUMAN RFX1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| EP300_HUMAN | 2.26 | -0.29 | 1.75 | n/a | n/a | |||
| GCR_HUMAN | 2.36 | -0.04 | 2.33 | n/a | No Hit | |||
| RFX1_HUMAN | -0.82 | 1.94 | 2.50 | n/a | No Hit |
Items per page:
1 – 3 of 3