rs236160 chr20:5935554 C>T

Sequence
attcatttcctatgcttcaaagat[C/T]ttgccctttctcataaaaactcag
ASB for transcription factors
NR2C1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
NR2C1_HUMAN 1.99 -1.76 7.3·10-31.00 1.00 -0.50 Weak Concordant
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Motif analysis

NR2C1_HUMAN Weak Concordant
NR2C1_HUMAN pic

Genetic associations

GRASP 2 hour glucose,  urinary albumin-to-creatinine ratio
GTEx eQTL Adipose_Subcutaneous,  Artery_Aorta,  Artery_Tibial,  Brain_Cerebellar_Hemisphere,  Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Colon_Sigmoid,  Colon_Transverse,  Esophagus_Mucosa,  Esophagus_Muscularis,  Heart_Left_Ventricle,  Muscle_Skeletal,  Nerve_Tibial,  Skin_Sun_Exposed_Lower_leg,  Stomach,  Testis,  Thyroid,  Whole_Blood

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