rs2363041 chr19:54481433 G>A
- Sequence
ggaccaacaaatactgaatgagaa[G/A]aatgaatggcagatggaaaagaac
- ASB in cell types
- neural cell GM12878 (female B-cells lymphoblastoid cell line) MS-1 (Small cell lung carcinoma) FT282 (normal human fallopian tube tissue)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.20 | 0.36 | 1.21 | n/a | No Hit | |||
| RAD21_HUMAN | 1.48 | -0.56 | 1.17 | n/a | n/a | |||
| STAG1_HUMAN | 0.66 | -0.76 | 1.23 | n/a | n/a |
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