rs2363227 chr17:21295031 G>T
- Sequence
agccatcaggccacagggagagcc[G/T]gtcactggggcctgcgcagtcagg
- ASB in cell types
- HT1080 (fibrosarcoma) LNCaP C4-2B (prostate carcinoma)
- ASB for transcription factors
- RBM25_HUMAN SSRP1_HUMAN SCRT2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RBM25_HUMAN | 1.94 | -0.89 | 2.00 | n/a | n/a | |||
| SSRP1_HUMAN | 1.59 | -1.47 | 2.00 | n/a | n/a | |||
| SCRT2_HUMAN | 1.47 | n/a | 2.00 | n/a | No Hit |
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