rs236467 chr6:36729424 G>A
- Sequence
ttcctgtttctcttcccacttccc[G/A]taaattgtgaggtcatcattgtgg
- ASB in cell types
- CD14+ monocytes MDM(monocyte derived macrophages) macrophages form periferal blood
- ASB for transcription factors
- SPI1_HUMAN STAT1_HUMAN TF65_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 1.84 | 0.33 | 1.80 | 0.51 | Weak Discordant | |||
| STAT1_HUMAN | 2.09 | -1.01 | 3.00 | -1.06 | Weak Concordant | |||
| TF65_HUMAN | 1.06 | -5.04 | 2.50 | n/a | No Hit |
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Motif analysis
