rs2364712 chr2:177171658 A>G

Sequence
gccaggccccaaaaggctagacca[A/G]aatggagtcactcatgccacataa
ASB in cell types
RH4 (alveolar rhabdomyosarcoma)
ASB for transcription factors
TYY1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TYY1_HUMAN 2.46 -0.51 1.3·10-30.96 2.00 -1.74 Weak Concordant
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Motif analysis

TYY1_HUMAN Weak Concordant
TYY1_HUMAN pic

Genetic associations

GRASP adiponectin levels,  total cholesterol
GTEx eQTL Brain_Cerebellar_Hemisphere

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