rs2366915 chr10:24418740 C>T
- Sequence
tcctagggggcagtgtttgtaacc[C/T]tttttaaaaagaaattacacccag
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) GM02610 (Lymphoblastoid Cell Lines) epithelial cell of prostate esophagus squamous epithelium
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.48 | 1.24 | 1.32 | n/a | No Hit | |||
| STAG1_HUMAN | -0.14 | 3.00 | 1.07 | n/a | n/a |
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