rs2367704 chr5:38872281 C>T
- Sequence
gagtcattcagcactcactgatag[C/T]gtatgttaatataaggcgttcttc
- ASB in cell types
- HAEC (human aortic endothelial cells) AGS (gastric adenocarcinoma)
- ASB for transcription factors
- JUN_HUMAN GATA4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUN_HUMAN | 2.33 | -1.11 | 1.78 | n/a | No Hit | |||
| GATA4_HUMAN | 2.27 | -2.27 | 1.00 | -1.81 | Weak Concordant |
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Motif analysis
