rs2369633 chr1:205211934 T>C

Sequence
tctcttcattttaaaaagtgttcc[T/C]aatccctctatgagcgtccctgag
ASB in cell types
HEK293 (embryonic kidney) K562 (myelogenous leukemia)

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HEK293 (embryonic kidney) 0.19 0.77 1.005.0·10-6 1.97
K562 (myelogenous leukemia) 0.90 0.51 2.3·10-41.00 2.91
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Motif analysis

No data available

Genetic associations

EMBL-EBI blond vs. brown/black hair color,  hair color
GRASP waist hip ratio
GTEx eQTL Artery_Tibial,  Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Brain_Nucleus_accumbens_basal_ganglia,  Esophagus_Muscularis,  Muscle_Skeletal,  Nerve_Tibial,  Skin_Sun_Exposed_Lower_leg,  Spleen,  Testis,  Thyroid

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