rs2370576 chr3:134485999 C>G
- Sequence
cgcttgctcctgccacgccccccc[C/G]ccctcccccgcatcacgtgtctgc
- ASB in cell types
- MOLT-4 (Adult T acute lymphoblastic leukemia) CTV-1 (Adult T acute lymphoblastic leukemia) tibial nerve BJ1-hTERT (Human fibroblast telomerase immortalized cell line)
- ASB for transcription factors
- EP300_HUMAN SPT5H_HUMAN FLI1_HUMAN CREB1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| EP300_HUMAN | -3.67 | 4.06 | 1.00 | n/a | n/a | |||
| SPT5H_HUMAN | -1.78 | 2.71 | 1.00 | n/a | n/a | |||
| FLI1_HUMAN | -3.27 | 3.37 | 1.00 | n/a | No Hit | |||
| CREB1_HUMAN | -2.05 | 2.05 | 1.00 | n/a | No Hit | |||
| ETS1_HUMAN | -2.14 | 2.79 | 1.00 | n/a | No Hit |
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Motif analysis
