rs2371357 chr3:64491328 A>C
- Sequence
tgtaacactcaccgtatttgtgta[A/C]ggggctttaacccatgcccgcgtg
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) MCF7 TamR (invasive ductal breast carcinoma Tamoxifen resistant)
- ASB for transcription factors
- ESR1_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | -0.89 | 1.77 | 5.07 | n/a | No Hit | |||
| FOXA1_HUMAN | -0.32 | 1.42 | 3.73 | -1.43 | Weak Discordant |
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Motif analysis
