rs2373039 chr2:217223723 A>G
- Sequence
gtccccacatccttagttgtacac[A/G]taacatgcttaccgtgtgcttgct
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) MOLM-13(acute monocytic leukemia(AML), Homo sapiens) CD14+ monocytes EOL-1 (Acute myeloid leukemia)
- ASB for transcription factors
- STAT1_HUMAN SMRC1_HUMAN IKZF1_HUMAN SMCA4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 2.24 | -0.53 | 1.75 | n/a | No Hit | |||
| SMRC1_HUMAN | 2.75 | -2.70 | 1.25 | n/a | n/a | |||
| IKZF1_HUMAN | 1.72 | -0.29 | 1.33 | n/a | n/a | |||
| SMCA4_HUMAN | 2.00 | -0.59 | 1.00 | n/a | n/a | |||
| IKZF2_HUMAN | 1.03 | -0.96 | 1.00 | n/a | n/a |
Items per page:
1 – 5 of 6