rs2373927 chr7:151027324 A>C
- Sequence
caagtacccagacacaaaacactg[A/C]ggaaggctgcagggacctctgcct
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- ZN740_HUMAN REQU_HUMAN SMCA4_HUMAN MGAP_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN740_HUMAN | 3.65 | -3.53 | 1.00 | n/a | No Hit | |||
| REQU_HUMAN | 1.91 | n/a | 1.50 | n/a | n/a | |||
| SMCA4_HUMAN | 2.29 | -2.80 | 1.50 | n/a | n/a | |||
| MGAP_HUMAN | 2.51 | n/a | 1.50 | n/a | No Hit | |||
| ZN592_HUMAN | 2.67 | n/a | 1.50 | n/a | n/a |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Brain_Cerebellar_Hemisphere, Breast_Mammary_Tissue, Colon_Transverse, Esophagus_Mucosa, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Small_Intestine_Terminal_Ileum, Testis, Thyroid, Whole_Blood