rs2377099 chr3:184748712 A>G

Sequence
aagcaagggctgggactcagcctc[A/G]tggttctccctctccccctgcagg
ASB in cell types
foreskin keratinocyte HMEC (human mammary epithelial cells)

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
foreskin keratinocyte n/a 0.76 1.007.5·10-7 2.17
HMEC (human mammary epithelial cells) -2.34 2.45 1.000.02 1.00
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Motif analysis

No data available

Genetic associations

GRASP asthma,  eye color,  ldl cholesterol,  spine bone mineral density (bmd)
GTEx eQTL Brain_Cerebellar_Hemisphere,  Brain_Cortex,  Colon_Transverse,  Esophagus_Muscularis,  Heart_Left_Ventricle,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Thyroid

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