rs2377868 chr3:186519245 T>C
- Sequence
gagacaagctgtctcacctcctca[T/C]ctcctgagcacaactcacccacag
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) Th1-cells
- ASB for transcription factors
- TBX21_HUMAN COT1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TBX21_HUMAN | 1.11 | 1.61 | 1.00 | 4.40 | Concordant | |||
| COT1_HUMAN | n/a | 2.19 | 1.00 | n/a | No Hit |
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Motif analysis
