rs2380532 chr2:13682963 A>G
- Sequence
cttcatatttattaggtagaatca[A/G]cagagaggaagaggtaatggttgg
- ASB in cell types
- LNCaP (prostate carcinoma) breast tumor
- ASB for transcription factors
- ANDR_HUMAN ESR1_HUMAN MTOR_HUMAN FOXA1_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 1.32 | 0.19 | 2.23 | -4.55 | Concordant | |||
| ESR1_HUMAN | 2.54 | n/a | 2.00 | n/a | No Hit | |||
| MTOR_HUMAN | 2.77 | -5.29 | 2.00 | n/a | n/a | |||
| FOXA1_HUMAN | 1.49 | -0.89 | 2.17 | -3.60 | Concordant |
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Motif analysis
