rs238132 chr18:3450457 C>A
- Sequence
ccgctcctggcccctccagacccc[C/A]gccttgcctcgcgctgggagggga
- ASB in cell types
- HEK293 (embryonic kidney) primary B-CLL cells 22RV1 (prostate carcinoma) breast tumor
- ASB for transcription factors
- BRD4_HUMAN GLIS2_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BRD4_HUMAN | 1.45 | 0.24 | 1.93 | n/a | n/a | |||
| GLIS2_HUMAN | 2.06 | n/a | 2.00 | -1.02 | Weak Concordant |
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Motif analysis
