rs2383894 chr8:73436421 T>C

Sequence
atttctctccttaacctcctctta[T/C]acctgattttacacgtatatttat
ASB in cell types
HEK293 (embryonic kidney)
ASB for transcription factors
ZN426_HUMAN ZNF34_HUMAN ZN394_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZN426_HUMAN n/a 3.83 1.008.4·10-6 2.00 n/a n/a
ZNF34_HUMAN -4.89 2.82 1.007.1·10-3 2.00 0.63 Weak Concordant
ZN394_HUMAN -2.34 2.45 1.000.03 1.00 0.89 Weak Concordant
Items per page:
1 – 3 of 3

Motif analysis

ZNF34_HUMAN Weak Concordant
ZNF34_HUMAN pic

Genetic associations

EMBL-EBI white matter growth
GRASP asthma,  digit span backward,  total cholesterol,  type 1 diabetes, gender differentiated

Download