rs2383899 chr8:73349828 C>T

Sequence
acaatagacactagtaagagacaa[C/T]aggtgcttccacctcattcacagc
ASB in cell types
HepG2 (hepatoblastoma)
ASB for transcription factors
RBM25_HUMAN SCRT2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RBM25_HUMAN 1.45 -0.59 8.0·10-31.00 1.50 n/a n/a
SCRT2_HUMAN 2.71 -2.78 0.011.00 1.00 -4.78 Concordant
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Motif analysis

SCRT2_HUMAN Concordant
SCRT2_HUMAN pic

Genetic associations

GTEx eQTL Adipose_Subcutaneous,  Testis,  Thyroid

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