rs2387283 chr5:180555459 A>C
- Sequence
tatcacctctagacatctgtgttt[A/C]tttcttggaagtgtagtttcaaag
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- TAL1_HUMAN MTG16_HUMAN VEZF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TAL1_HUMAN | -0.32 | 1.05 | 1.88 | 1.09 | Weak Concordant | |||
| MTG16_HUMAN | n/a | 0.41 | 2.00 | n/a | n/a | |||
| VEZF1_HUMAN | -0.93 | 1.80 | 2.00 | n/a | No Hit |
Items per page:
1 – 3 of 3
Motif analysis
