rs2388094 chr13:29369100 C>T
- Sequence
cagcagaagaaaaggttacagata[C/T]caggtaccaggcagcgggaaaaaa
- ASB in cell types
- CTV-1 (Adult T acute lymphoblastic leukemia) GM17942 (lymphoblastoid cell) GM12878 (female B-cells lymphoblastoid cell line) foreskin keratinocyte
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| CTV-1 (Adult T acute lymphoblastic leukemia) | 0.41 | 1.27 | 1.00 | |||
| GM17942 (lymphoblastoid cell) | -1.85 | 2.24 | 1.00 | |||
| GM12878 (female B-cells lymphoblastoid cell line) | -0.48 | 0.89 | 1.14 | |||
| foreskin keratinocyte | 1.64 | 2.14 | 3.00 |
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