rs2388139 chr10:7494345 C>T
- Sequence
cccaataaatatttgttgagcaaa[C/T]aaatgaatgcacacacaatgaaat
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 0.96 | 0.40 | 1.17 | -1.49 | Weak Concordant |
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Motif analysis
