rs2390257 chr7:20151884 A>G

Sequence
tcaccatattaaacagtgatggac[A/G]gagtgtaatggttaaagtcatgga
ASB in cell types
CWR22 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 2.39 0.50 3.0·10-30.96 2.00 -2.78 Concordant
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Motif analysis

ANDR_HUMAN Concordant
ANDR_HUMAN pic

Genetic associations

GRASP mitral annular calcium
GTEx eQTL Cells_EBV-transformed_lymphocytes,  Lung,  Minor_Salivary_Gland,  Nerve_Tibial,  Pancreas,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Testis

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