rs2391832 chr13:110471383 T>C
- Sequence
gggcaggctgggggtgggtggtga[T/C]tgaggaactgatcagtttctgaaa
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) primary B-CLL cells
- ASB for transcription factors
- MTA2_HUMAN IKZF1_HUMAN IKZF2_HUMAN ELF1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MTA2_HUMAN | 2.66 | n/a | 1.50 | n/a | n/a | |||
| IKZF1_HUMAN | 2.16 | n/a | 1.50 | n/a | n/a | |||
| IKZF2_HUMAN | 1.54 | -2.83 | 1.50 | n/a | n/a | |||
| ELF1_HUMAN | 3.01 | -3.10 | 1.00 | -0.58 | Weak Concordant | |||
| ARNT_HUMAN | 2.90 | -2.63 | 1.00 | n/a | No Hit |
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Motif analysis
