rs239223 chr6:100664469 A>G
- Sequence
acaaaccacaccatctagtggcca[A/G]ccaagtaaataacaacttacacat
- ASB in cell types
- erythroid progenitors THP-1 (acute monocytic leukemia)
- ASB for transcription factors
- RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 1.04 | 0.50 | 1.62 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP cystatin c in serum, diastolic blood pressure (dbp), height, ldl cholesterol, mitral annular calcium, obesity with early age of onset (age >2), refractive error, rheumatoid arthritis, total cholesterol
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Brain_Anterior_cingulate_cortex_BA24, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Lung