rs2393283 chr10:57540249 C>T
- Sequence
cccattcagctggaagaactaaag[C/T]ttcttccactactctacatcagcc
- ASB in cell types
- LNCaP C4-2B (prostate carcinoma) LNCaP (prostate carcinoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.74 | -1.02 | 1.11 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP adiponectin levels, resistance to kuru in aged women despite likely exposure, stabilized warfarin dose