rs2393799 chr12:121132209 C>T
- Sequence
ggtgtccctcactgaataggtcaa[C/T]aaacctaactttgttggactgcca
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- ELF1_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ELF1_HUMAN | 2.38 | -2.07 | 1.00 | n/a | No Hit | |||
| ESR1_HUMAN | 1.04 | 0.41 | 1.69 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adrenal_Gland, Artery_Aorta, Esophagus_Gastroesophageal_Junction, Testis, Thyroid, Whole_Blood