rs2394278 chr10:66664214 A>G
- Sequence
aatctcccccagacacttttatat[A/G]aatatttatagggttgacattgaa
- ASB in cell types
- VCaP (prostate carcinoma) LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN SUMO2_HUMAN ANDR_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -0.04 | 1.81 | 1.60 | -4.35 | Discordant | |||
| SUMO2_HUMAN | n/a | 3.22 | 2.00 | n/a | n/a | |||
| ANDR_HUMAN | -0.14 | 1.51 | 1.70 | n/a | No Hit |
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Motif analysis
