rs2394784 chr10:71260002 G>A

Sequence
gggtttaagctggagcctctaggg[G/A]acaaacaagccaactgccaggcag
ASB in cell types
bipolar neuron HS-SY-2(Monophasic synovial sarcoma) transverse colon

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
bipolar neuron 2.27 -0.42 0.021.00 1.17
HS-SY-2(Monophasic synovial sarcoma) -1.01 1.97 1.000.03 2.00
transverse colon 2.17 -2.16 0.041.00 1.00
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Motif analysis

No data available

Genetic associations

GRASP parkinsons disease,  partial epilepsy,  rheumatoid arthritis,  triglycerides
GTEx eQTL Colon_Transverse,  Esophagus_Mucosa,  Testis,  Whole_Blood

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